Phylogenomic analysis of ultraconserved elements resolves the evolutionary and biogeographic history of segmented trapdoor spiders

Xu, Xin and Su, Yong-Chao and Ho, Simon Y. W. and Kuntner, Matjaz and Ono, Hirotsugu and Liu, Fengxiang and Chang, Chia-Chen and Warrit, Natapot and Sivayyapram, Varat and Aung, Khin Pyae Pyae and Pham, Dinh Sac and Norma-Rashid, Y. and Li, Daiqin (2021) Phylogenomic analysis of ultraconserved elements resolves the evolutionary and biogeographic history of segmented trapdoor spiders. Systematic Biology, 70 (6). pp. 1110-1122. ISSN 1063-5157, DOI https://doi.org/10.1093/sysbio/syaa098.

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Abstract

The segmented trapdoor spiders (Liphistiidae) are the sole surviving family of the suborder Mesothelae, which forms the sister lineage to all other living spiders. Liphistiids have retained a number of plesiomorphic traits and their present-day distribution is limited to East and Southeast Asia. Studying this group has the potential to shed light on the deep evolutionary history of spiders, but the phylogeny and divergence times of the family have not been resolved with confidence. We performed phylogenomic and molecular dating analyses of 2765 ultraconserved element loci from 185 liphistiid taxa. Our analyses show that the crown group of Liphistiidae appeared in the mid-Cretaceous at 102 Ma (95% credibility interval 92-113 Ma), but it was not until the Neogene that much of the diversification within the family occurred in mainland Southeast and East Asia. This diversification was coincident with tectonic events such as the extension of the East Asian continental margin, as well as geological upheavals in Indochina induced by the collision between India and Asia. Our study highlights the important role of major tectonic events in shaping the evolutionary history, present-day diversity, and geographical distribution of mesothele and liphistiid spiders.

Item Type: Article
Funders: National Natural Science Foundation of China (NSFC) [NSFC-32070430], National Natural Science Foundation of China [NSFC-31272324], Natural Science Foundation of Hunan Province [2017JJ3202], bilateral China and Slovenia exchange project from China [12-8], bilateral China and Slovenia exchange project from Slovenia [Bi-CN/18-20-022], Slovenian Research Agency - Slovenia [P1-0255] [J1-9163], Ministry of Education, Singapore [R-154-000-A52-114], China Scholarship Council
Uncontrolled Keywords: Biogeography; Concatenation; Liphistiidae; Molecular dating; Summary coalescent; UCEs
Subjects: Q Science > QH Natural history
Divisions: Faculty of Science > Institute of Biological Sciences
Depositing User: Ms Zaharah Ramly
Date Deposited: 14 Sep 2022 07:01
Last Modified: 14 Sep 2022 07:01
URI: http://eprints.um.edu.my/id/eprint/34582

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